Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015921124.1_cds_XP_016470143.1_62623
CDS Infomation

[gene=LOC107792447] [db_xref=GeneID:107792447] [protein=transcription factor 25-like] [protein_id=XP_016470143.1] [location=complement(join(9178..9421,9586..10497,12012..12571,16965..17144))] [gbkey=CDS]
Sequence

ATGTCGGTTCGTTTTATGAAAAAAATCTTGAAAGAAAAAGAACAACCAGCTGAGCCTCAA
CAACTCATCAACAACAGCGAAGAAGAAGAATCTGAATCTGAATCGCCTCCTCATTCTTCC
TCTACCTTTCGTAATCCATTCGATCTCCTTGACGACGAAGACGATGCTGTTGACGACCAG
GAAAACAAGGCAGATAACGATGATGGATCCTCAACCCGTAACAGCGATGAGAAGCAGTCC
TTCACCACAAAAGCCACCCCTGAAGCATTTGTGTTGTCAGATAGCAAATTAAAGAAAAAG
AAAAAGAATAAAAACAAGGAGAAGTCACAACCAAGAGCTGGGGATAATGACAACTCTTGG
AACGAGTCATTAGAACAGTTGTCAATTAAAGATGACTCTTCTCATCTTGAGCATGTTGCT
CACGATCCTGGAAAATCTAATACGACAAATTTTAATGGCAGAGGAAAAGTGGTCAAGCAG
TGTACATCATCTGTCTTACAAGTAGACCCAAAATTTCTTAATGCAGAAAATGAACTAAAA
AGGATATTTGGTTCTAGAGTGGTGAATTCGTTTGAAAAAAGTCATCAAACTGGAAGTTCT
AGACAATCAAGAGGCGGAAGACGTGGGAGCCAGAACCACCGGAAGACTATTATTGTTTCT
CCTTTAGAACATTGGCCGAGGTGGGATGGATCACTATCGATGGAACTTATGGAAACCAGA
GATGGGATCTGTTATTTTAGGTATGTACATACATCATCCTACAGCCAAGCCCAGGAAGCA
TTTGAAAGTGCTAAGGCAGTTCATGATTTTAACGGTATCGTGAATATTCTATTGCATCAT
CCATATCATGTTGAGTCACTCATTACATTAGCCGAATATTATAAATTCAGTGGTGAACAT
CAAATGTCGGCTGATTGCACCGCAAAATGTCTGTATGCATTGGAACGTGCATGGCATCCA
ATGTTCACTCCTTTGATGGGCAACTGTCATCTTAAGTATAGTTGTGAAACCAACAAGCCG
TTGTTCTCTGTGCTTTTCTCCCACATGAAAAACATGGATAGACGCGGCTGCCATCGGTCT
GCTCTTGAGCTTTGCAAATTATTGCTTCTACTAGATTCAGACGATCCAATGGGAGTCTTG
TTCTGCATTGACTACTATTCTTTAAGAGCGGAGGAGTATACATGGCTTGAACAGTTCTCT
GAGCAATATAAGAGTGATAATTCTTTGTGGTTATTTCCAAATTACTCCTATTCTCTTGCC
GTGTGCCGTTACTACATCGAAAATGAGGAACATGCCAAAGATATAAAGACAGAGAATTTA
AAAGCTTCTTCAACAGATCTCATGAAGCAGGCATTGATGCTACATCCTTCAGTGTTGAAA
AAGTTAGTGTCAAAGGTACCCTTAAAGGATAAAGCTTGGACTAGCATAATCAAGCACAAG
TTCTTTAGCTCTGATCAAACGGGGACACCTTCCTTGGATCACTTGATCAATATATATGTT
GAAAGGAGCTACCTTATATGGAGGCTTCCTGATCTCCAGAAGTTTCTTAGGGATTCTGCA
CTTTCAGTAATTGAGACACTGCAGAATGACGGGAATGATGTCGGAGACTGGACGTGTGTG
CGAAAAGAAGCTTTTTCATCTGAGAAAAATGAGTATTCTCACTTGCTGGTATCAGATTTC
TCTGATTCAGTTCCGACTTTGCCTCCTGATAACTTGCAAAATTTCATGGTTGACCCGAGG
AGAGAGGTGCCAAATGATGCTCAACCTGCAAACAACCGTGTCCAAGATCTGTCTGATCGA
AATGCAATTGCTGTCTTGCTCGAGTCTATGTTACCGTGGATTAATTACGGTTCTGGCCAT
GACCAGCTTGATCATGATGAGCAGGCTAATGATTGA

Peptide Sequence

PEP ID

XP_016470143.1
PEP Infomation

PREDICTED: transcription factor 25-like [Nicotiana tabacum]
Sequence

MSVRFMKKILKEKEQPAEPQQLINNSEEEESESESPPHSSSTFRNPFDLLDDEDDAVDDQ
ENKADNDDGSSTRNSDEKQSFTTKATPEAFVLSDSKLKKKKKNKNKEKSQPRAGDNDNSW
NESLEQLSIKDDSSHLEHVAHDPGKSNTTNFNGRGKVVKQCTSSVLQVDPKFLNAENELK
RIFGSRVVNSFEKSHQTGSSRQSRGGRRGSQNHRKTIIVSPLEHWPRWDGSLSMELMETR
DGICYFRYVHTSSYSQAQEAFESAKAVHDFNGIVNILLHHPYHVESLITLAEYYKFSGEH
QMSADCTAKCLYALERAWHPMFTPLMGNCHLKYSCETNKPLFSVLFSHMKNMDRRGCHRS
ALELCKLLLLLDSDDPMGVLFCIDYYSLRAEEYTWLEQFSEQYKSDNSLWLFPNYSYSLA
VCRYYIENEEHAKDIKTENLKASSTDLMKQALMLHPSVLKKLVSKVPLKDKAWTSIIKHK
FFSSDQTGTPSLDHLINIYVERSYLIWRLPDLQKFLRDSALSVIETLQNDGNDVGDWTCV
RKEAFSSEKNEYSHLLVSDFSDSVPTLPPDNLQNFMVDPRREVPNDAQPANNRVQDLSDR
NAIAVLLESMLPWINYGSGHDQLDHDEQAND

Transcript Sequence

Gene sequence data has not been registered.